Information for 21-CGTCCACATTGT (Motif 33)


Reverse Opposite:

p-value:1e-15
log p-value:-3.523e+01
Information Content per bp:1.858
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets123.7 +/- 67.9bp
Average Position of motif in Background129.1 +/- 42.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CGTCCACATTGT-----
TGTTCCCATTGTGTACT

MA0078.1_Sox17/Jaspar

Match Rank:2
Score:0.69
Offset:4
Orientation:forward strand
Alignment:CGTCCACATTGT-
----CTCATTGTC

MA0442.1_SOX10/Jaspar

Match Rank:3
Score:0.67
Offset:6
Orientation:forward strand
Alignment:CGTCCACATTGT
------CTTTGT

PB0177.1_Sox7_2/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGTCCACATTGT-----------
-GTGCTAATTGTGTGTGTACGCT

MA0130.1_ZNF354C/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGTCCACATTGT
-ATCCAC-----

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CGTCCACATTGT---
-----CCWTTGTYYB

MA0515.1_Sox6/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CGTCCACATTGT---
-----CCATTGTTTT

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CGTCCACATTGT--
----NCCATTGTTC

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CGTCCACATTGT---
-----CCATTGTTNY

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGTCCACATTGT-----
--NNNCCATTGTGTNAN