Information for 22-ATGAGCTAGCTC (Motif 34)


Reverse Opposite:

p-value:1e-11
log p-value:-2.686e+01
Information Content per bp:1.692
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets111.9 +/- 66.0bp
Average Position of motif in Background138.7 +/- 50.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATGAGCTAGCTC
-TGACCTARTT-

PH0152.1_Pou6f1_2/Jaspar

Match Rank:2
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------ATGAGCTAGCTC
AAACATAATGAGGTTGC--

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------ATGAGCTAGCTC
GACGATAATGAGCTTGC--

MA0071.1_RORA_1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATGAGCTAGCTC
-TGACCTTGAT-

MA0072.1_RORA_2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATGAGCTAGCTC--
TTGACCTANTTATN

PB0090.1_Zbtb12_1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ATGAGCTAGCTC--
CTAAGGTTCTAGATCAC

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ATGAGCTAGCTC
--CAGCC-----

MA0150.2_Nfe2l2/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----ATGAGCTAGCTC
CAGCATGACTCAGCA-

MA0506.1_NRF1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:ATGAGCTAGCTC
-TGCGCAGGCGC

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:ATGAGCTAGCTC
CTGCGCATGCGC