Information for 24-GTACGTACCG (Motif 35)


Reverse Opposite:

p-value:1e-10
log p-value:-2.475e+01
Information Content per bp:1.446
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets108.5 +/- 64.6bp
Average Position of motif in Background141.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0027.1_Gmeb1_1/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----GTACGTACCG--
NNNTNGTACGTAANNNN

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTACGTACCG
-TACGTGCV-

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTACGTACCG
GGGTACGTGC--

MA0032.1_FOXC1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTACGTACCG
GGTAAGTA---

MA0124.1_NKX3-1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTACGTACCG
-TAAGTAT--

PB0094.1_Zfp128_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTACGTACCG---
TCTTTGGCGTACCCTAA

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTACGTACCG-
NNACTTACCTN

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTACGTACCG
GCACGTAY--

MA0025.1_NFIL3/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTACGTACCG-
TTATGTAACAT

PH0053.1_Hoxa6/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GTACGTACCG-
NTNAGGTAATTACCTT