Information for 2-TTCCATTCGA (Motif 4)


Reverse Opposite:

p-value:1e-92
log p-value:-2.136e+02
Information Content per bp:1.758
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets112.2 +/- 67.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTCCATTCGA
ATTTTCCATT---

MA0152.1_NFATC2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTCCATTCGA
TTTTCCA-----

MA0081.1_SPIB/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTCCATTCGA
TTCCTCT---

PB0169.1_Sox15_2/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TTCCATTCGA
TNGAATTTCATTNAN

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTCCATTCGA---
NNTTTGCACACGGCCC

POL001.1_MTE/Jaspar

Match Rank:6
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------TTCCATTCGA--
NCGACCGCTCCGCTCGAAA

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTCCATTCGA---
ATTTGCATACAATGG

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTCCATTCGA
CTTCCGGT---

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTCCATTCGA
GGGATTGCATNN--

PB0106.1_Arid5a_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTCCATTCGA-----
CATACAATACGAAATAA