Information for 5-GGGCTACCCT (Motif 6)


Reverse Opposite:

p-value:1e-68
log p-value:-1.576e+02
Information Content per bp:1.532
Number of Target Sequences with motif8431.0
Percentage of Target Sequences with motif30.18%
Number of Background Sequences with motif7018.8
Percentage of Background Sequences with motif25.52%
Average Position of motif in Targets109.7 +/- 61.3bp
Average Position of motif in Background110.4 +/- 64.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GGGCTACCCT--
GCTGGGGGGTACCCCTT

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGGCTACCCT----
CNNNGCTACTGTANNN

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGGCTACCCT----
TNNTGCTACTGTNNNN

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGGCTACCCT--
TTGGGGGCGCCCCTAG

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber et al.)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTACCCT-
GGGGATTCCCCC

PB0094.1_Zfp128_1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGGCTACCCT--
TCTTTGGCGTACCCTAA

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGGCTACCCT--
GGACCACCCACG

MA0597.1_THAP1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGGCTACCCT--
---CTGCCCGCA

MA0111.1_Spz1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTACCCT
GCTGTTACCCT

PH0163.1_Six3/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGGCTACCCT---
ANANGTGATACCCTATN