Information for 5-AGKAAACG (Motif 8)


Reverse Opposite:

p-value:1e-63
log p-value:-1.461e+02
Information Content per bp:1.606
Number of Target Sequences with motif9919.0
Percentage of Target Sequences with motif35.51%
Number of Background Sequences with motif8466.7
Percentage of Background Sequences with motif30.79%
Average Position of motif in Targets109.4 +/- 62.2bp
Average Position of motif in Background108.4 +/- 67.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AGKAAACG---
---AACCGANA

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGKAAACG---
-NHAACBGYYV

PH0044.1_Homez/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGKAAACG-------
NNTAAAAACGATGTTNT

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGKAAACG--
--YAACBGCC

MA0593.1_FOXP2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGKAAACG--
AAGTAAACAAA

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGKAAACG
NACAGGAAAT-

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGKAAACG---
NDGTAAACARRN

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGKAAACG---
-CCAACTGCCA

PB0045.1_Myb_1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGKAAACG-------
ATGGAAACCGTTATTTT

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGKAAACG
AAAGTAAACA