Information for 1-TAGGCGGAATGC (Motif 1)


Reverse Opposite:

p-value:1e-6
log p-value:-1.569e+01
Information Content per bp:1.951
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif27.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets247.7 +/- 128.2bp
Average Position of motif in Background188.3 +/- 146.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TAGGCGGAATGC
--CCWGGAATGY

MA0090.1_TEAD1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TAGGCGGAATGC-
-CNGAGGAATGTG

MA0057.1_MZF1_5-13/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAGGCGGAATGC
GGAGGGGGAA---

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TAGGCGGAATGC
--CCWGGAATGY

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TAGGCGGAATGC
--NCTGGAATGC

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber et al.)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TAGGCGGAATGC--
--GGGGGAATCCCC

MA0081.1_SPIB/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TAGGCGGAATGC
--AGAGGAA---

MA0471.1_E2F6/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TAGGCGGAATGC
-GGGCGGGAAGG

MA0119.1_TLX1::NFIC/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TAGGCGGAATGC--
TTGGCATGGTGCCA

MA0024.2_E2F1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TAGGCGGAATGC
CGGGCGGGAGG-