Information for 4-GACTCAATTG (Motif 11)


Reverse Opposite:

p-value:1e-3
log p-value:-7.867e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets141.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0099.2_JUN::FOS/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GACTCAATTG
TGACTCA----

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GACTCAATTG
TAATCAATTA

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GACTCAATTG---
NNNTATTGAATTGNNN

MA0063.1_Nkx2-5/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GACTCAATTG
---TTAATTG

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GACTCAATTG---
CTCACACAATGGCGC

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GACTCAATTG
ATGACTCATC--

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GACTCAATTG--------
-AATCAATTGTTCCGCTA

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GACTCAATTG
ATGASTCATH--

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GACTCAATTG-----
NNATNAATTGTTTNN

MA0490.1_JUNB/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GACTCAATTG
GGATGACTCAT---