Information for 6-TAGCTTCGGA (Motif 12)


Reverse Opposite:

p-value:1e-3
log p-value:-7.867e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets392.0 +/- 0.0bp
Average Position of motif in Background363.5 +/- 41.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TAGCTTCGGA
--GCTTCC--

MA0164.1_Nr2e3/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TAGCTTCGGA
CAAGCTT----

PB0035.1_Irf5_1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAGCTTCGGA----
NTGGTTTCGGTTNNN

PB0034.1_Irf4_1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TAGCTTCGGA---
TNTGGTTTCGATACN

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TAGCTTCGGA
--GCTCCG--

PB0036.1_Irf6_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TAGCTTCGGA---
NNNTTGGTTTCGNTNNN

PB0115.1_Ehf_2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TAGCTTCGGA-------
-AAGATCGGAANTNNNA

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TAGCTTCGGA
CCGCATAGCAACGGA

PB0037.1_Isgf3g_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TAGCTTCGGA----
TNAGTTTCGATTTTN

MA0048.1_NHLH1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TAGCTTCGGA
NCGCAGCTGCGN-