Information for 8-AACTAACTTA (Motif 14)


Reverse Opposite:

p-value:1e-3
log p-value:-7.867e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets336.0 +/- 0.0bp
Average Position of motif in Background204.9 +/- 44.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0028.1_En1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AACTAACTTA---
GCGAACTAATTAATGC

PH0108.1_Msx3/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AACTAACTTA---
CAAAACCAATTAATTT

PB0081.1_Tcf1_1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AACTAACTTA---
ACTTAGTTAACTAAAAA

PH0167.1_Tcf1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AACTAACTTA---
CCTTAGTTAACTAAAAT

PH0045.1_Hoxa1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AACTAACTTA-
ACGGTAATTAGCTCAG

PH0040.1_Hmbox1/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AACTAACTTA-
GANGTTAACTAGTTTNN

MA0135.1_Lhx3/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AACTAACTTA--
AAATTAATTAATC

PH0154.1_Prrx1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AACTAACTTA-----
GTAACTAATTAACTACT

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AACTAACTTA---
AAAAATAACAAACGG

MA0124.1_NKX3-1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AACTAACTTA
---ATACTTA