Information for 9-CGCAGGTGTCTC (Motif 16)


Reverse Opposite:

p-value:1e-3
log p-value:-7.867e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets140.0 +/- 0.0bp
Average Position of motif in Background312.1 +/- 57.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CGCAGGTGTCTC
NNCAGGTGNN--

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CGCAGGTGTCTC---
GCGGAGGTGTCGCCTC

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGCAGGTGTCTC
-GCAGCTGTNN-

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CGCAGGTGTCTC
---AGGTGTCA-

MA0522.1_Tcf3/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGGTGTCTC
NTGCAGCTGTG--

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGCAGGTGTCTC
NNVVCAGCTGBN--

MA0499.1_Myod1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGCAGGTGTCTC-
TGCAGCTGTCCCT

MA0103.2_ZEB1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGCAGGTGTCTC
--CAGGTGAGG-

MA0500.1_Myog/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGGTGTCTC
NNGCAGCTGTC--

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGCAGGTGTCTC
-ACAGCTGTTN-