Information for 10-ACGGTCATCTCC (Motif 17)


Reverse Opposite:

p-value:1e-3
log p-value:-7.867e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets152.0 +/- 0.0bp
Average Position of motif in Background93.5 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ACGGTCATCTCC
---GTCATN---

PB0014.1_Esrra_1/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----ACGGTCATCTCC
TATTCAAGGTCATGCGA

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----ACGGTCATCTCC
TCTCAAAGGTCACGAG-

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----ACGGTCATCTCC
TCTCAAAGGTCACCTG-

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACGGTCATCTCC
TCAAGGTCAN----

MA0141.2_Esrrb/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----ACGGTCATCTCC
AGCTCAAGGTCA-----

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACGGTCATCTCC
-AGGTCA-----

MA0071.1_RORA_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACGGTCATCTCC
ATCAAGGTCA-----

MA0592.1_ESRRA/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACGGTCATCTCC
CCAAGGTCACA---

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----ACGGTCATCTCC
ANGNAAAGGTCA-----