Information for 11-TCCAGCTTCGAG (Motif 18)


Reverse Opposite:

p-value:1e-3
log p-value:-7.867e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets179.0 +/- 0.0bp
Average Position of motif in Background183.7 +/- 76.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TCCAGCTTCGAG
----GCTTCC--

MA0164.1_Nr2e3/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCCAGCTTCGAG
-CAAGCTT----

MA0048.1_NHLH1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCCAGCTTCGAG
NCGCAGCTGCGN-

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGCTTCGAG-
TNTCCTGCTGTGNNG

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCCAGCTTCGAG---
TNTGGTTTCGATACN

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGCTTCGAG-
TCNCCTGCTGNGNNN

MA0500.1_Myog/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCCAGCTTCGAG
NNGCAGCTGTC--

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCCAGCTTCGAG
NNACAGCTGC---

MA0522.1_Tcf3/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCCAGCTTCGAG
NTGCAGCTGTG--

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGCTTCGAG-
NNTCCTGCTGTGNNN