Information for 14-GCCCCCGACTTA (Motif 20)


Reverse Opposite:

p-value:1e-3
log p-value:-7.867e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets267.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCCCCGACTTA
TCCGCCCCCGCATT-

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GCCCCCGACTTA
GGTCCCGCCCCCTTCTC-

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCCCCGACTTA-
AAGCCCCCCAAAAAT

PB0100.1_Zfp740_1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCCCCCGACTTA
CCCCCCCCCCCACTTG

MA0162.2_EGR1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GCCCCCGACTTA
CCCCCGCCCCCGCC---

PB0201.1_Zfp281_2/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GCCCCCGACTTA
AGGAGACCCCCAATTTG

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCCCCCGACTTA
-CCCCCCCC---

MA0122.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GCCCCCGACTTA-
----NCCACTTAN

YY1(Zf)/Promoter/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCCCCCGACTTA
GCCGCCATCTTG

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------GCCCCCGACTTA
TCACCCCGCCCCAAATT--