Information for 9-TGTAACGAAC (Motif 21)


Reverse Opposite:

p-value:1e-3
log p-value:-7.174e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets190.0 +/- 0.0bp
Average Position of motif in Background36.0 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0158.1_Rfx3_2/Jaspar

Match Rank:1
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TGTAACGAAC-------
NNTNGNNGTAACCAAGNNNNAGN

PB0159.1_Rfx4_2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGTAACGAAC---
NNNGTAACTANGNNA

MA0025.1_NFIL3/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGTAACGAAC
TTATGTAACAT--

PB0018.1_Foxk1_1/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TGTAACGAAC---
AAAATGTAAACAAACAG

PB0019.1_Foxl1_1/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TGTAACGAAC---
TAAATGTAAACAAAGGT

PB0015.1_Foxa2_1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TGTAACGAAC---
AAAAAGTAAACAAAGAC

MA0031.1_FOXD1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGTAACGAAC
-GTAAACAT-

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGTAACGAAC--
AGAAACGAAAGT

PB0108.1_Atf1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGTAACGAAC---
GAATGACGAATAAC

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGTAACGAAC
TATGTAAACANG