Information for 15-GAATGCGTAA (Motif 26)


Reverse Opposite:

p-value:1e-3
log p-value:-7.174e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets170.0 +/- 0.0bp
Average Position of motif in Background418.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0043.1_HLF/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GAATGCGTAA--
NATTACGTAACC

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAATGCGTAA
-ATTGCATAA

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAATGCGTAA
CCWGGAATGY----

PB0136.1_IRC900814_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAATGCGTAA--
ATGGAAAGTCGTAAAA

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAATGCGTAA-
-ATTGCGCAAC

PH0148.1_Pou3f3/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAATGCGTAA----
AAAATATGCATAATAAA

MA0090.1_TEAD1/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GAATGCGTAA
CNGAGGAATGTG---

MA0051.1_IRF2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAATGCGTAA-------
GGAAAGCGAAACCAAAAC

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAATGCGTAA
NCTGGAATGC----

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAATGCGTAA
CCWGGAATGY----