Information for 15-CCGTCACCTGCA (Motif 32)


Reverse Opposite:

p-value:1e-3
log p-value:-7.174e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets114.0 +/- 0.0bp
Average Position of motif in Background220.5 +/- 132.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CCGTCACCTGCA
--NNCACCTGNN

MA0464.1_Bhlhe40/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CCGTCACCTGCA-
--CTCACGTGCAC

MA0103.2_ZEB1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CCGTCACCTGCA
-CCTCACCTG--

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCGTCACCTGCA-
NNGGCGACACCTCNNN

MA0522.1_Tcf3/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCGTCACCTGCA-
--CACAGCTGCAG

E-box(bHLH)/Promoter/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCGTCACCTGCA
CCGGTCACGTGA-

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCGTCACCTGCA
--GTCACGTGGM

MA0093.2_USF1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCGTCACCTGCA
-GGTCACGTGGC

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCGTCACCTGCA
-NGKCACGTGM-

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCGTCACCTGCA
-GGTCACGTGA-