Information for 16-GCGGGGATAGGC (Motif 33)


Reverse Opposite:

p-value:1e-3
log p-value:-7.174e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets208.0 +/- 0.0bp
Average Position of motif in Background274.4 +/- 122.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0107.1_Ascl2_2/Jaspar

Match Rank:1
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GCGGGGATAGGC
NATNGGGNGGGGANAN--

MA0056.1_MZF1_1-4/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCGGGGATAGGC
-TGGGGA-----

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCGGGGATAGGC
CWGGCGGGAA-----

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCGGGGATAGGC
TGGCGGGAAAHB--

PH0139.1_Pitx3/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCGGGGATAGGC----
AGGGGGATTAGCTGCC

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCGGGGATAGGC
GGCGGGAAAH---

MA0470.1_E2F4/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCGGGGATAGGC
GGGCGGGAAGG---

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCGGGGATAGGC
GGCGGGAARN---

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------GCGGGGATAGGC
NAGANTGGCGGGGNGNA--

MA0599.1_KLF5/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCGGGGATAGGC
--GGGGNGGGGC