Information for 17-CTCTTTTCTGAG (Motif 34)


Reverse Opposite:

p-value:1e-3
log p-value:-7.174e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets280.0 +/- 0.0bp
Average Position of motif in Background147.9 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0037.2_GATA3/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTCTTTTCTGAG
-TCTTATCT---

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTCTTTTCTGAG
NCCTTATCTG--

MA0482.1_Gata4/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTCTTTTCTGAG
-TCTTATCTCCC

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTCTTTTCTGAG
NNCTTATCTN--

MA0036.2_GATA2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTCTTTTCTGAG
AGATTCTTATCTGT-

MA0035.3_Gata1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTCTTTTCTGAG
TTCTTATCTGT-

PH0068.1_Hoxc13/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTCTTTTCTGAG----
NAATTTTACGAGNTNN

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTCTTTTCTGAG-
---TTTTATTRGN

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTCTTTTCTGAG----
----TTTCTNAGAAAN

PH0048.1_Hoxa13/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTCTTTTCTGAG----
ANATTTTACGAGNNNN