Information for 19-TTCTCCATGACC (Motif 36)


Reverse Opposite:

p-value:1e-3
log p-value:-7.174e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets353.0 +/- 0.0bp
Average Position of motif in Background130.5 +/- 112.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:TTCTCCATGACC
-----CATGAC-

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTCTCCATGACC-
-TGACCTTGACCT

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:TTCTCCATGACC-
-------TGACCT

MA0067.1_Pax2/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TTCTCCATGACC
----NCGTGACN

MA0152.1_NFATC2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTCTCCATGACC
TTTTCCA-----

MA0159.1_RXR::RAR_DR5/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTCTCCATGACC-
TGACCTCTCNNTGACCT

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTCTCCATGACC
NNAATTCTCGNTNAN-

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTCTCCATGACC
ATTTTCCATT---

MA0074.1_RXRA::VDR/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTCTCCATGACC-
TGAACCCGATGACCC

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTCTCCATGACC-------
---NNCNTGACCCCGCTCT