Information for 25-CGCGCGCGCG (Motif 38)


Reverse Opposite:

p-value:1e-1
log p-value:-4.098e+00
Information Content per bp:1.530
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif37410.1
Percentage of Background Sequences with motif79.64%
Average Position of motif in Targets211.3 +/- 138.3bp
Average Position of motif in Background220.3 +/- 170.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)3.94
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0095.1_Zfp161_1/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---CGCGCGCGCG---
NCANGCGCGCGCGCCA

MA0506.1_NRF1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CGCGCGCGCG
GCGCCTGCGCA

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGCGCG---
NTCGCGCGCCTTNNN

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CGCGCGCGCG--
ATAAGGGCGCGCGAT

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CGCGCGCGCG
CTGCGCATGCGC-

NRF(NRF)/Promoter/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGCGCGCGCG-
GCGCATGCGCAC

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGCGCG--
ANTGCGGGGGCGGN

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGCGCGCGCG
--GGCGCGCT

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGCGCG
YCCGCCCACGCN

MA0024.2_E2F1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGCGCGCGCG
CCTCCCGCCCN