Information for 1-CTTCCTAG (Motif 7)


Reverse Opposite:

p-value:1e-3
log p-value:-8.885e+00
Information Content per bp:1.906
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif22.22%
Number of Background Sequences with motif715.7
Percentage of Background Sequences with motif1.52%
Average Position of motif in Targets195.2 +/- 97.6bp
Average Position of motif in Background223.3 +/- 151.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0463.1_Bcl6/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CTTCCTAG------
TTTCCTAGAAAGCA

MA0598.1_EHF/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CTTCCTAG
CCTTCCTG-

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CTTCCTAG--
ATTTCCAAGAA

MA0144.2_STAT3/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTTCCTAG---
TTTCCCAGAAN

PB0181.1_Spdef_2/Jaspar

Match Rank:5
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----CTTCCTAG---
GATAACATCCTAGTAG

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCTAG-
ACTTCCTGBT

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTTCCTAG-------
TTTCCTGGAAAGNNN

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CTTCCTAG
GCTTCC---

MA0137.3_STAT1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTTCCTAG---
TTTCCTGGAAA

PB0006.1_Bcl6b_1/Jaspar

Match Rank:10
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CTTCCTAG-----
NNNATTCCTCGAAAGN