Information for 1-AYACAYATAYAC (Motif 1)


Reverse Opposite:

p-value:1e-46
log p-value:-1.062e+02
Information Content per bp:1.814
Number of Target Sequences with motif226.0
Percentage of Target Sequences with motif24.09%
Number of Background Sequences with motif2675.2
Percentage of Background Sequences with motif8.47%
Average Position of motif in Targets119.2 +/- 61.3bp
Average Position of motif in Background114.2 +/- 161.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)3.73
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0082.1_Irx2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AYACAYATAYAC--
TAAATACATGTAAAATT

PH0084.1_Irx3_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AYACAYATAYAC-
NNTATTACATGTANNNT

PH0087.1_Irx6/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AYACAYATAYAC--
AAAATACATGTAAAAAT

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AYACAYATAYAC-
ANTATTACATGTANNNN

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AYACAYATAYAC-
ANTNNTACATGTANNTN

PH0085.1_Irx4/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AYACAYATAYAC--
AATATACATGTAAAACA

PB0198.1_Zfp128_2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AYACAYATAYAC
NNTATANATATACN-

MA0464.1_Bhlhe40/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AYACAYATAYAC
-CTCACGTGCAC

PB0163.1_Six6_2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AYACAYATAYAC-----
ANNNGGATATATCCNNN

MA0042.1_FOXI1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AYACAYATAYAC
AAACAAACANNC