Information for 15-CATCTATWTGAG (Motif 10)


Reverse Opposite:

p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.768
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.41%
Number of Background Sequences with motif248.2
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets112.1 +/- 68.4bp
Average Position of motif in Background120.4 +/- 108.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CATCTATWTGAG-
---CTATTTTTGG

MF0008.1_MADS_class/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CATCTATWTGAG-
---CCATATATGG

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CATCTATWTGAG--
--KCTATTTTTRGH

MA0497.1_MEF2C/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CATCTATWTGAG----
-TTCTATTTTTAGNNN

PH0134.1_Pbx1/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CATCTATWTGAG
TCACCCATCAATAAACA

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CATCTATWTGAG
DGATCRATAN---

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------CATCTATWTGAG
ANTTNTACATGTANTTN--

PB0078.1_Srf_1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CATCTATWTGAG---
-TTCCATATATGGAA

PH0082.1_Irx2/Jaspar

Match Rank:9
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------CATCTATWTGAG
ANTNTTACATGTATNTA--

MA0052.2_MEF2A/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CATCTATWTGAG---
NNGCTATTTTTAGCN