Information for 17-TAGCATAGYATA (Motif 13)


Reverse Opposite:

p-value:1e-10
log p-value:-2.344e+01
Information Content per bp:1.849
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif27.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets157.7 +/- 53.2bp
Average Position of motif in Background96.5 +/- 61.6bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)2.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TAGCATAGYATA-
ATTTGCATACAATGG

MA0033.1_FOXL1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TAGCATAGYATA
----TATACATA

PH0145.1_Pou2f3/Jaspar

Match Rank:3
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------TAGCATAGYATA
TNTAATTTGCATACNA--

PH0144.1_Pou2f2/Jaspar

Match Rank:4
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------TAGCATAGYATA
TNTAATTTGCATANNN--

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TAGCATAGYATA---
AACACCAAAACAAAGGA

PB0106.1_Arid5a_2/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TAGCATAGYATA---
CATACAATACGAAATAA

PB0079.1_Sry_1/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:TAGCATAGYATA------
--NANTATTATAATTNNN

PB0174.1_Sox30_2/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:TAGCATAGYATA------
--NCGTATTATAATCNTA

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--TAGCATAGYATA---
NNNTCCATCCCATAANN

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--TAGCATAGYATA-
CAAACAACAACACCT