Information for 19-GATGAGCTAT (Motif 16)


Reverse Opposite:

p-value:1e-6
log p-value:-1.460e+01
Information Content per bp:1.934
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif15.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets142.7 +/- 57.9bp
Average Position of motif in Background145.4 +/- 62.8bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GATGAGCTAT----
NNNGTGACCTTTGNNN

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GATGAGCTAT----
NNNNTGACCTTTNNNN

MA0491.1_JUND/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GATGAGCTAT-
NATGAGTCACN

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GATGAGCTAT
GATGAGTCAT

PB0142.1_Jundm2_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GATGAGCTAT---
ATTGATGAGTCACCAA

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GATGAGCTAT----
--TGACCTTTNCNT

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GATGAGCTAT
CATGAC----

MA0071.1_RORA_1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GATGAGCTAT--
--TGACCTTGAT

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GATGAGCTAT--
NATGACTCATNN

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GATGAGCTAT--
NATGASTCABNN