Information for 14-ACAAGCGC (Motif 18)


Reverse Opposite:

p-value:1e-4
log p-value:-1.066e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets120.2 +/- 65.1bp
Average Position of motif in Background122.1 +/- 36.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------ACAAGCGC--
NNAGGGACAAGGGCNC

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACAAGCGC---
AGCAACAGCCGCACC

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACAAGCGC
RNAACAATGG-

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACAAGCGC
-CACGCA-

MA0143.3_Sox2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACAAGCGC
AACAAAGG-

MA0506.1_NRF1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACAAGCGC
TGCGCAGGCGC

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACAAGCGC
GAACAATGGN

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACAAGCGC
RACAAWGG-

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACAAGCGC
--CAGCC-

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACAAGCGC--
GCGCATGCGCAG