Information for 22-TGTGATACGG (Motif 21)


Reverse Opposite:

p-value:1e-3
log p-value:-8.275e+00
Information Content per bp:1.964
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets96.0 +/- 68.9bp
Average Position of motif in Background170.6 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0105.1_Arid3a_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGTGATACGG--
NNATNTGATANNNNN

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGATACGG
NNNTTTNTAATACNG

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGTGATACGG----
ANANNTGATACCCNATN

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGTGATACGG-
-CAGATAAGGN

PH0162.1_Six2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGTGATACGG----
ANANGTGATACCCCATT

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGTGATACGG-
-NAGATAAGNN

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGTGATACGG
NNHTGTGGTTWN-

PH0163.1_Six3/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGTGATACGG----
ANANGTGATACCCTATN

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGTGATACGG----
TAAACTGATAAGAAGAT

PH0161.1_Six1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGTGATACGG----
ANNNATGATACCCCATC