| p-value: | 1e-3 |
| log p-value: | -7.628e+00 |
| Information Content per bp: | 1.898 |
| Number of Target Sequences with motif | 3.0 |
| Percentage of Target Sequences with motif | 0.32% |
| Number of Background Sequences with motif | 5.6 |
| Percentage of Background Sequences with motif | 0.02% |
| Average Position of motif in Targets | 108.4 +/- 62.7bp |
| Average Position of motif in Background | 129.6 +/- 36.7bp |
| Strand Bias (log2 ratio + to - strand density) | 3.6 |
| Multiplicity (# of sites on avg that occur together) | 4.33 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 1 |
| Score: | 0.62
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --CATAAATACTAC
GTCATAAAAN---- |
|
|
|
MA0465.1_CDX2/Jaspar
| Match Rank: | 2 |
| Score: | 0.62
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----CATAAATACTAC
AAGCCATAAAA----- |
|
|
|
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer
| Match Rank: | 3 |
| Score: | 0.62
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---CATAAATACTAC
GGCCATAAATCA--- |
|
|
|
MF0005.1_Forkhead_class/Jaspar
| Match Rank: | 4 |
| Score: | 0.61
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CATAAATACTAC
AAATAAACA---- |
|
|
|
MA0485.1_Hoxc9/Jaspar
| Match Rank: | 5 |
| Score: | 0.61
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---CATAAATACTAC
GGCCATAAATCAC-- |
|
|
|
MA0594.1_Hoxa9/Jaspar
| Match Rank: | 6 |
| Score: | 0.60
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --CATAAATACTAC
GCCATAAATCA--- |
|
|
|
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
| Match Rank: | 7 |
| Score: | 0.60
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---CATAAATACTAC
GGCCATAAATCA--- |
|
|
|
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer
| Match Rank: | 8 |
| Score: | 0.60
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---CATAAATACTAC
NCYAATAAAA----- |
|
|
|
PB0178.1_Sox8_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.59
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----CATAAATACTAC
NNTNTCATGAATGT--- |
|
|
|
PH0055.1_Hoxa7_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.59
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CATAAATACTAC
TNCCATTAATTACTNC |
|
|
|
