Information for 11-GGAGATTTGGAC (Motif 5)


Reverse Opposite:

p-value:1e-18
log p-value:-4.154e+01
Information Content per bp:1.776
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets131.0 +/- 79.8bp
Average Position of motif in Background112.5 +/- 44.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGAGATTTGGAC
AAGGATATNTN---

MA0136.1_ELF5/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGAGATTTGGAC
AAGGAAGTA-----

MA0156.1_FEV/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGAGATTTGGAC
CAGGAAAT------

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGAGATTTGGAC
GGGAATTGTAGT-

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGATTTGGAC
NNATTGGACTTTNGNN-

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGAGATTTGGAC
NACAGGAAAT------

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGAGATTTGGAC
DCCGGAARYN-----

MA0038.1_Gfi1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGAGATTTGGAC
CNGTGATTTN---

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:9
Score:0.53
Offset:-8
Orientation:reverse strand
Alignment:--------GGAGATTTGGAC
GCATTCTGGGAATTGTAGTT

MA0017.1_NR2F1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GGAGATTTGGAC--
TGACCTTTGAACCT