| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
PDF |
| 1 |  | p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer | 1e-10 | -2.381e+01 | 0.0000 | 43.0 | 4.58% | 446.5 | 1.41% | motif file (matrix) |
pdf |
| 2 |  | p53(p53)/Saos-p53-ChIP-Seq/Homer | 1e-10 | -2.381e+01 | 0.0000 | 43.0 | 4.58% | 446.5 | 1.41% | motif file (matrix) |
pdf |
| 3 |  | Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-9 | -2.301e+01 | 0.0000 | 230.0 | 24.52% | 5167.1 | 16.36% | motif file (matrix) |
pdf |
| 4 |  | Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-9 | -2.139e+01 | 0.0000 | 371.0 | 39.55% | 9518.7 | 30.13% | motif file (matrix) |
pdf |
| 5 |  | HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-9 | -2.109e+01 | 0.0000 | 206.0 | 21.96% | 4589.4 | 14.53% | motif file (matrix) |
pdf |
| 6 |  | HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer | 1e-7 | -1.647e+01 | 0.0000 | 68.0 | 7.25% | 1135.9 | 3.60% | motif file (matrix) |
pdf |
| 7 |  | p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer | 1e-6 | -1.416e+01 | 0.0000 | 65.0 | 6.93% | 1138.1 | 3.60% | motif file (matrix) |
pdf |
| 8 |  | c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-4 | -1.129e+01 | 0.0004 | 61.0 | 6.50% | 1144.7 | 3.62% | motif file (matrix) |
pdf |
| 9 |  | NRF(NRF)/Promoter/Homer | 1e-4 | -1.017e+01 | 0.0011 | 23.0 | 2.45% | 294.8 | 0.93% | motif file (matrix) |
pdf |
| 10 |  | bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.945e+00 | 0.0034 | 46.0 | 4.90% | 859.7 | 2.72% | motif file (matrix) |
pdf |
| 11 |  | BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-3 | -8.437e+00 | 0.0052 | 315.0 | 33.58% | 8932.5 | 28.27% | motif file (matrix) |
pdf |
| 12 |  | Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer | 1e-3 | -7.821e+00 | 0.0088 | 72.0 | 7.68% | 1602.0 | 5.07% | motif file (matrix) |
pdf |
| 13 |  | CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-3 | -7.626e+00 | 0.0099 | 98.0 | 10.45% | 2347.4 | 7.43% | motif file (matrix) |
pdf |
| 14 |  | Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer | 1e-3 | -7.495e+00 | 0.0105 | 160.0 | 17.06% | 4193.9 | 13.28% | motif file (matrix) |
pdf |
| 15 |  | c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-3 | -6.924e+00 | 0.0173 | 68.0 | 7.25% | 1544.5 | 4.89% | motif file (matrix) |
pdf |
| 16 |  | Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer | 1e-2 | -6.335e+00 | 0.0292 | 284.0 | 30.28% | 8210.7 | 25.99% | motif file (matrix) |
pdf |
| 17 |  | n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.260e+00 | 0.0297 | 88.0 | 9.38% | 2160.4 | 6.84% | motif file (matrix) |
pdf |
| 18 |  | NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-2 | -5.513e+00 | 0.0592 | 190.0 | 20.26% | 5337.4 | 16.89% | motif file (matrix) |
pdf |
| 19 |  | Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-2 | -5.285e+00 | 0.0704 | 167.0 | 17.80% | 4647.9 | 14.71% | motif file (matrix) |
pdf |
| 20 |  | Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer | 1e-2 | -4.943e+00 | 0.0942 | 19.0 | 2.03% | 338.6 | 1.07% | motif file (matrix) |
pdf |
| 21 |  | GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -4.762e+00 | 0.1075 | 30.0 | 3.20% | 627.6 | 1.99% | motif file (matrix) |
pdf |