Information for 10-CTTTCCCGGA (Motif 10)


Reverse Opposite:

p-value:1e-12
log p-value:-2.769e+01
Information Content per bp:1.595
Number of Target Sequences with motif249.0
Percentage of Target Sequences with motif16.62%
Number of Background Sequences with motif4516.0
Percentage of Background Sequences with motif10.59%
Average Position of motif in Targets112.4 +/- 63.8bp
Average Position of motif in Background112.8 +/- 73.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:CTTTCCCGGA--
--TTCCNGGAAG

MA0137.3_STAT1/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CTTTCCCGGA--
-TTTCCTGGAAA

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CTTTCCCGGA---
-TTTCCNGGAAAN

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CTTTCCCGGA---
NNCTTCCNGGAAGN

MA0518.1_Stat4/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CTTTCCCGGA--
NNNTTTCCTGGAAA

MA0144.2_STAT3/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTTTCCCGGA--
-TTTCCCAGAAN

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTTTCCCGGA----
ATTTCCNGGAAATN

PB0075.1_Sp100_1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTTTCCCGGA----
ATTTTACGGAAAAT

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CTTTCCCGGA--
NNNCTTTCCAGGAAA

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTTTCCCGGA--
TTTTCGCGCGAA