Information for 11-CCGTTTCATC (Motif 13)


Reverse Opposite:

p-value:1e-10
log p-value:-2.472e+01
Information Content per bp:1.657
Number of Target Sequences with motif98.0
Percentage of Target Sequences with motif6.54%
Number of Background Sequences with motif1332.6
Percentage of Background Sequences with motif3.13%
Average Position of motif in Targets102.6 +/- 60.5bp
Average Position of motif in Background111.2 +/- 73.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CCGTTTCATC--
--ATTGCATCAT

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CCGTTTCATC--
--ATTGCATCAK

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCGTTTCATC
TGGTTTCAGT

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCGTTTCATC----
AATCCCTTTGATCTATC

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCGTTTCATC---
-SCTGTCARCACC

MA0151.1_ARID3A/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCGTTTCATC
---TTTAAT-

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCGTTTCATC
BRRCVGTTDN---

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCGTTTCATC----
ATTTCCTTTGATCTATA

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCGTTTCATC---
TNNNNGGTGTCATNTNT

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCGTTTCATC----
NNTTCCTTTGATCTNNA