Information for 14-GAGTGTTTCCAA (Motif 14)


Reverse Opposite:

p-value:1e-10
log p-value:-2.435e+01
Information Content per bp:1.802
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif21.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets139.5 +/- 48.6bp
Average Position of motif in Background132.8 +/- 48.3bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0157.1_FOXO3/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GAGTGTTTCCAA
---TGTTTACA-

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAGTGTTTCCAA
--CGGTTTCAAA

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAGTGTTTCCAA
GGGGATTTCC--

MA0105.3_NFKB1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGTGTTTCCAA
GGGAATTTCCC-

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAGTGTTTCCAA-
---ATTTTCCATT

MA0101.1_REL/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGTGTTTCCAA
GGGGATTTCC--

MA0107.1_RELA/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGTGTTTCCAA
GGGAATTTCC--

MA0152.1_NFATC2/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GAGTGTTTCCAA
----TTTTCCA-

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAGTGTTTCCAA
--CTGTTTAC--

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGTGTTTCCAA
NGGGGATTTCCC-