Information for 16-TGCATTAAGTAG (Motif 15)


Reverse Opposite:

p-value:1e-9
log p-value:-2.258e+01
Information Content per bp:1.639
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets104.8 +/- 70.3bp
Average Position of motif in Background95.9 +/- 35.4bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0135.1_Phox2a/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGCATTAAGTAG---
CAGCATTAATTAGTAG

PH0149.1_Pou3f4/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGCATTAAGTAG---
AATTAATTAATTAATTC

PH0146.1_Pou3f1/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TGCATTAAGTAG--
NANTTAATTAATTANNN

PH0142.1_Pou1f1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TGCATTAAGTAG---
GATTAATTAATTAAGTC

PH0147.1_Pou3f2/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGCATTAAGTAG----
GATAATTAATTAGTTTG

PH0003.1_Arx/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGCATTAAGTAG-----
TNCATTAATTAATGNAC

PH0030.1_Esx1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGCATTAAGTAG-----
TCNATTAATTAATNNAN

MA0135.1_Lhx3/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGCATTAAGTAG--
-AAATTAATTAATC

PH0159.1_Rhox6/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGCATTAAGTAG----
NNGCATTAATTAANGCA

PH0010.1_Alx1_1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGCATTAAGTAG-----
CGAATTAATTAATCACC