Information for 10-AGCWTWCG (Motif 16)


Reverse Opposite:

p-value:1e-9
log p-value:-2.175e+01
Information Content per bp:1.696
Number of Target Sequences with motif105.0
Percentage of Target Sequences with motif7.01%
Number of Background Sequences with motif1552.5
Percentage of Background Sequences with motif3.64%
Average Position of motif in Targets113.4 +/- 61.2bp
Average Position of motif in Background113.7 +/- 75.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0117.1_Mafb/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGCWTWCG-
-GCTGACGC

MA0164.1_Nr2e3/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGCWTWCG
AAGCTTG--

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCWTWCG
CAGCC----

NRF(NRF)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCWTWCG---
GCGCATGCGCAC

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGCWTWCG---
-ACTTCCGGNT

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCWTWCG---
GCGCATGCGCAG

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGCWTWCG--
NRYTTCCGGY

MA0506.1_NRF1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGCWTWCG--
GCGCCTGCGCA

PB0027.1_Gmeb1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGCWTWCG--------
GAGTGTACGTAAGATGG

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGCWTWCG--
NRYTTCCGGH