Information for 11-CGGCTTTT (Motif 17)


Reverse Opposite:

p-value:1e-9
log p-value:-2.171e+01
Information Content per bp:1.596
Number of Target Sequences with motif458.0
Percentage of Target Sequences with motif30.57%
Number of Background Sequences with motif10056.5
Percentage of Background Sequences with motif23.59%
Average Position of motif in Targets110.8 +/- 61.4bp
Average Position of motif in Background111.6 +/- 71.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGGCTTTT
-NGCTN--

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGGCTTTT
CAGCTGTT

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGGCTTTT-
-GGCVGTTR

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CGGCTTTT---
GGNGCGNCTGTTNNN

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGGCTTTT-----
CACGGCAGTTGGTNN

PB0136.1_IRC900814_2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCTTTT---
TTTTACGACTTTCCAT

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CGGCTTTT-----
NNNTGGCAGTTGGTNN

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGGCTTTT-
ACAGCTGTTV

MA0521.1_Tcf12/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CGGCTTTT
NNGCAGCTGTT

TATA-Box(TBP)/Promoter/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGGCTTTT------
--CCTTTTATAGNC