Information for 19-GTTAGAAGCGCG (Motif 19)


Reverse Opposite:

p-value:1e-9
log p-value:-2.157e+01
Information Content per bp:1.801
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets150.8 +/- 24.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTTAGAAGCGCG
---NGAAGC---

PB0095.1_Zfp161_1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTTAGAAGCGCG-----
-NCANGCGCGCGCGCCA

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTTAGAAGCGCG----
-ATAAAGGCGCGCGAT

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTTAGAAGCGCG
GGTTAGAGACCT-

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GTTAGAAGCGCG
-----CAGCC--

MA0111.1_Spz1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTTAGAAGCGCG
AGGGTAACAGC---

PB0194.1_Zbtb12_2/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GTTAGAAGCGCG
TATCATTAGAACGCT-

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GTTAGAAGCGCG----
-ATAAGGGCGCGCGAT

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GTTAGAAGCGCG-
NNNTTAGGTAGCNTNT

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GTTAGAAGCGCG-
ADGGYAGYAGCATCT