Information for 2-TATGTRYGTG (Motif 2)


Reverse Opposite:

p-value:1e-19
log p-value:-4.437e+01
Information Content per bp:1.503
Number of Target Sequences with motif155.0
Percentage of Target Sequences with motif10.35%
Number of Background Sequences with motif1977.0
Percentage of Background Sequences with motif4.64%
Average Position of motif in Targets116.3 +/- 56.2bp
Average Position of motif in Background115.9 +/- 110.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.81
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0507.1_POU2F2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TATGTRYGTG--
ATATGCAAATNNN

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TATGTRYGTG-
---GGACGTGC

PH0145.1_Pou2f3/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TATGTRYGTG---
TTGTATGCAAATTAGA

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TATGTRYGTG---
NTTNTATGAATGTGNNC

PH0144.1_Pou2f2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TATGTRYGTG---
TTGTATGCAAATTAGA

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TATGTRYGTG-
---RTACGTGC

MA0464.1_Bhlhe40/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TATGTRYGTG--
-NTGCACGTGAG

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TATGTRYGTG
----TGCGTG

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TATGTRYGTG
TTATGCAAAT-

MA0033.1_FOXL1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TATGTRYGTG
TATGTNTA--