Information for 12-TTAGGACG (Motif 20)


Reverse Opposite:

p-value:1e-9
log p-value:-2.102e+01
Information Content per bp:1.636
Number of Target Sequences with motif230.0
Percentage of Target Sequences with motif15.35%
Number of Background Sequences with motif4383.7
Percentage of Background Sequences with motif10.28%
Average Position of motif in Targets115.6 +/- 58.3bp
Average Position of motif in Background111.5 +/- 75.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0194.1_Zbtb12_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TTAGGACG--
TATCATTAGAACGCT

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTAGGACG
CTAGGCCT

PH0065.1_Hoxc10/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGGACG---
ANNTTTTACGACNTNN

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTAGGACG-----
CTACTAGGATGTNNTN

PH0066.1_Hoxc11/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGGACG---
NNNTTTTACGACNTTN

PH0077.1_Hoxd12/Jaspar

Match Rank:6
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TTAGGACG---
NNNATTTTACGACNNTN

PH0076.1_Hoxd11/Jaspar

Match Rank:7
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TTAGGACG---
ANNATTTTACGACNTNA

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTAGGACG--
--AGGCCTNG

PH0047.1_Hoxa11/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGGACG---
NNGTTTTACGACTTTA

MA0146.2_Zfx/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTAGGACG-------
-CAGGCCNNGGCCNN