Information for 18-GCGGTGCACC (Motif 25)


Reverse Opposite:

p-value:1e-7
log p-value:-1.660e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets114.2 +/- 49.8bp
Average Position of motif in Background161.8 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCGGTGCACC-
-CNGTCCTCCC

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCGGTGCACC-----
CAGATGTGCACATACGT

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCGGTGCACC-----
TACATGTGCACATAAAA

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCGGTGCACC----
CGAACAGTGCTCACTAT

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCGGTGCACC
-CGGAGC---

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GCGGTGCACC-
NNNANTGCAGTGCNNTT

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCGGTGCACC
GGGGGCGGGGCC--

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCGGTGCACC-----
GGGTGTGCCCAAAAGG

PB0156.1_Plagl1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCGGTGCACC----
GCTGGGGGGTACCCCTT

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTGCACC--
NNGCNCTGCGCGGC