Information for 23-ATTAAATAATAT (Motif 26)


Reverse Opposite:

p-value:1e-6
log p-value:-1.611e+01
Information Content per bp:1.967
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets86.0 +/- 64.6bp
Average Position of motif in Background130.0 +/- 57.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-ATTAAATAATAT-
TCTTTANTAATANN

PH0101.1_Lmx1b/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAATAATAT--
NNAATTAATTAAAAANN

PH0153.1_Prop1/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---ATTAAATAATAT--
CGAATTAATTAAGAAAC

PH0091.1_Lhx1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---ATTAAATAATAT--
CGAATTAATTAATAATG

PH0136.1_Phox2b/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----ATTAAATAATAT-
CGGAATTAATTAATAGG

PH0100.1_Lmx1a/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ATTAAATAATAT--
CGAATTAATTAAAAACC

PH0093.1_Lhx3/Jaspar

Match Rank:7
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ATTAAATAATAT--
GAAATTAATTAAATAAT

PH0128.1_Otp/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----ATTAAATAATAT-
CGTAATTAATTAATTGG

PB0001.1_Arid3a_1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATTAAATAATAT--
GGGTTTAATTAAAATTC

PH0095.1_Lhx5/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----ATTAAATAATAT-
ANNATTTAATTAATTNN