Information for 14-CGCTAGAT (Motif 27)


Reverse Opposite:

p-value:1e-6
log p-value:-1.594e+01
Information Content per bp:1.594
Number of Target Sequences with motif122.0
Percentage of Target Sequences with motif8.14%
Number of Background Sequences with motif2118.9
Percentage of Background Sequences with motif4.97%
Average Position of motif in Targets110.6 +/- 59.5bp
Average Position of motif in Background111.1 +/- 77.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0527.1_ZBTB33/Jaspar

Match Rank:1
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------CGCTAGAT
NAGNTCTCGCGAGAN

GFX(?)/Promoter/Homer

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CGCTAGAT
ATTCTCGCGAGA-

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CGCTAGAT--
GTTCTCGCGAGANCC

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGCTAGAT
NGCTN---

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGCTAGAT-
ATGCCAGACN

PB0090.1_Zbtb12_1/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CGCTAGAT---
CTAAGGTTCTAGATCAC

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CGCTAGAT----
----AGATAASR

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------CGCTAGAT--
CCTTCGGCGCCAAAAGG

PB0194.1_Zbtb12_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CGCTAGAT----
TATCATTAGAACGCT

MA0037.2_GATA3/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CGCTAGAT----
----AGATAAGA