Information for 3-AAMACWGCTC (Motif 3)


Reverse Opposite:

p-value:1e-16
log p-value:-3.849e+01
Information Content per bp:1.736
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif6.81%
Number of Background Sequences with motif1122.3
Percentage of Background Sequences with motif2.63%
Average Position of motif in Targets105.5 +/- 61.4bp
Average Position of motif in Background117.0 +/- 69.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAMACWGCTC
--CACAGN--

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAMACWGCTC-----
CGAACAGTGCTCACTAT

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAMACWGCTC-
-NAHCAGCTGD

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAMACWGCTC
--AACAGCTG

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AAMACWGCTC--
------GCTCCG

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AAMACWGCTC----
----CTGTTCCTGG

MA0521.1_Tcf12/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AAMACWGCTC---
--AACAGCTGCAG

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAMACWGCTC
NHAACBGYYV

MA0500.1_Myog/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AAMACWGCTC---
--GACAGCTGCAG

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AAMACWGCTC
GTAAACAG---