Information for 20-ATACGTAGAT (Motif 30)


Reverse Opposite:

p-value:1e-5
log p-value:-1.226e+01
Information Content per bp:1.849
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif115.0
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets116.9 +/- 68.8bp
Average Position of motif in Background126.5 +/- 95.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.73
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0124.1_NKX3-1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATACGTAGAT
ATACTTA---

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATACGTAGAT---
AGATGKDGAGATAAG

MA0032.1_FOXC1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATACGTAGAT
-TACTNNNN-

PB0198.1_Zfp128_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATACGTAGAT-
TGTATATATATACC

PB0096.1_Zfp187_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ATACGTAGAT--
TTATTAGTACATAN

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATACGTAGAT
ATATGCAAAT

MA0025.1_NFIL3/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ATACGTAGAT
ANGTTACATAA--

MA0033.1_FOXL1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATACGTAGAT
TATACATA---

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:ATACGTAGAT----
------AGATAASR

PB0027.1_Gmeb1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----ATACGTAGAT--
NNNTNGTACGTAANNNN