Information for 24-GTTACAACACAC (Motif 32)


Reverse Opposite:

p-value:1e-4
log p-value:-9.812e+00
Information Content per bp:1.932
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets96.1 +/- 58.4bp
Average Position of motif in Background165.4 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0133.1_BRCA1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GTTACAACACAC
---ACAACAC--

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTTACAACACAC
-TTGCAACATN-

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTTACAACACAC-
ATGTCACAACAACAC

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTTACAACACAC
TATCATTAGAACGCT-

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTTACAACACAC
CAAACAACAACACCT

MA0025.1_NFIL3/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTTACAACACAC
ANGTTACATAA---

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTTACAACACAC
ATTGCATCAT--

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTTACAACACAC
ATTGCATCAK--

POL007.1_BREd/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GTTACAACACAC
-----NANANAC

PB0032.1_IRC900814_1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTTACAACACAC---
ATTTACGACAAATAGC