Information for 25-ATACACCATAGT (Motif 33)


Reverse Opposite:

p-value:1e-4
log p-value:-9.812e+00
Information Content per bp:1.951
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets102.9 +/- 50.7bp
Average Position of motif in Background121.9 +/- 65.5bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)3.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0077.1_SOX9/Jaspar

Match Rank:1
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ATACACCATAGT--
-----CCATTGTTC

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATACACCATAGT--
CTCACACAATGGCGC

MA0143.3_Sox2/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:ATACACCATAGT-
-----CCTTTGTT

MA0040.1_Foxq1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATACACCATAGT
AATAAACAATN--

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----ATACACCATAGT
TCNNTTTACAGCGNNNT

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATACACCATAGT
AGAAACGAAAGT

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ATACACCATAGT
--AAACCACAGC

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ATACACCATAGT-
-NWAACCACADNN

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ATACACCATAGT--
GATAACATCCTAGTAG

PH0158.1_Rhox11_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----ATACACCATAGT
TCNCTTTACAGCGNNNT