Information for 9-TCCCCTCCAGAG (Motif 9)


Reverse Opposite:

p-value:1e-13
log p-value:-3.019e+01
Information Content per bp:1.869
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif21.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets143.5 +/- 47.3bp
Average Position of motif in Background122.8 +/- 67.7bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0057.1_MZF1_5-13/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCCCCTCCAGAG
TTCCCCCTAC----

PB0107.1_Ascl2_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCCCCTCCAGAG-
CTATCCCCGCCCTATT

MA0056.1_MZF1_1-4/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCCCCTCCAGAG
TCCCCA------

MA0154.2_EBF1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCCCCTCCAGAG-
--GTCCCCAGGGA

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCCCCTCCAGAG
-CCCCCCCC---

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCCCCTCCAGAG
CCCCCTGCTGTG

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCCCCTCCAGAG--
TACGCCCCGCCACTCTG

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCCCCTCCAGAG---
-CCCCCCCGGGGGNN

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCCCCTCCAGAG
TTCCCGCCWG--

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCCCCTCCAGAG
AGCCACTCAAG--