Information for 8-TTTGCTGCTT (Motif 11)


Reverse Opposite:

p-value:1e-7
log p-value:-1.779e+01
Information Content per bp:1.833
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif9.84%
Number of Background Sequences with motif538.4
Percentage of Background Sequences with motif1.14%
Average Position of motif in Targets161.1 +/- 80.2bp
Average Position of motif in Background177.7 +/- 105.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTGCTGCTT
ATTTCCTGTN-

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTGCTGCTT-----
ACTTGCTACCTACACC

MA0496.1_MAFK/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTGCTGCTT---
AAANTGCTGACTNAG

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCTGCTT
ATTTCCTGTN-

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:5
Score:0.60
Offset:-9
Orientation:forward strand
Alignment:---------TTTGCTGCTT-
ACTYKNATTCGTGNTACTTC

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTTGCTGCTT-----
ACATGCTACCTAATAC

MA0495.1_MAFF/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTTGCTGCTT----
NAAAANTGCTGACTCAGC

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTTGCTGCTT
--NGCTN---

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTTGCTGCTT----
AAATTTGCTGACTTAGA

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTTGCTGCTT--
AAAWWTGCTGACWWD