Information for 2-AATCGCAC (Motif 12)


Reverse Opposite:

p-value:1e-7
log p-value:-1.756e+01
Information Content per bp:1.916
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif9.02%
Number of Background Sequences with motif439.4
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets169.8 +/- 68.1bp
Average Position of motif in Background164.8 +/- 115.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0038.1_Gfi1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AATCGCAC
CAAATCACTG

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AATCGCAC--
GAAAAAATTGCAAGG

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AATCGCAC
YTAATCCY--

PB0135.1_Hoxa3_2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AATCGCAC--
CCTTAATNGNTTTT

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AATCGCAC--
GGGATTGCATNN

MA0483.1_Gfi1b/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AATCGCAC--
AAATCACAGCA

PH0123.1_Obox3/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AATCGCAC---
ATAGTTAATCCCCCNNA

PH0122.1_Obox2/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------AATCGCAC---
ATAGTTAATCCCCCTCA

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AATCGCAC-
NTATYGATCH

MA0063.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AATCGCAC
TTAATTG---